User:Bradley Monk - Revision history

Bradley Monk at 08:10, 21 January 2018

2018-01-21T08:10:40Z

← Older revision		Revision as of 01:10, 21 January 2018
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	== ~~New~~-~~ish Pages~~ ==		{{SmallBox\|display=block\|float=none\|clear=both\|width=50%\|margin=5px auto\|padding=5px auto\|bg-color=#FFF\|font=Arial\|font-size=18px\|text-align=center\|border-style=groove\|border-width=2px\|border-color=#8c9091\|border-radius=6px\|CUSTOM WIKI EDITING TOOLBAR\|txt-align=center\|txt-size=16px\|To customize the wiki editing toolbar, visit: [http://bradleymonk.com/User:Bradley_Monk/common.js User:Bradley_Monk/common.js]}}

			<br><br><br>

			{{SmallBox\|Assorted Pages\|
	* [[PhD Demographics]]		* [[PhD Demographics]]
	* [[Actin]]		* [[Actin]]
	* [[TYRO3]]		* [[TYRO3]]
			}}


	{{SmallBox\|display=block\|float=none\|clear=both\|width=50%\|margin=5px auto\|padding=5px auto\|bg-color=#FFF\|font=Arial\|font-size=18px\|text-align=center\|border-style=groove\|border-width=2px\|border-color=#8c9091\|border-radius=6px\|CUSTOM WIKI EDITING TOOLBAR\|txt-align=center\|txt-size=16px\|To customize the wiki editing toolbar, [http://bradleymonk.com/User:Bradley_Monk/common.js GO HERE] (User:Bradley_Monk/common.js)}}

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Bradley Monk at 08:07, 21 January 2018

2018-01-21T08:07:23Z

← Older revision		Revision as of 01:07, 21 January 2018
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	* [[TYRO3]]		* [[TYRO3]]


			{{SmallBox\|display=block\|float=none\|clear=both\|width=50%\|margin=5px auto\|padding=5px auto\|bg-color=#FFF\|font=Arial\|font-size=18px\|text-align=center\|border-style=groove\|border-width=2px\|border-color=#8c9091\|border-radius=6px\|CUSTOM WIKI EDITING TOOLBAR\|txt-align=center\|txt-size=16px\|To customize the wiki editing toolbar, [http://bradleymonk.com/User:Bradley_Monk/common.js GO HERE] (User:Bradley_Monk/common.js)}}

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Bradley Monk at 12:29, 8 December 2017

2017-12-08T12:29:53Z

← Older revision		Revision as of 05:29, 8 December 2017
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			== New-ish Pages ==

			* [[PhD Demographics]]
			* [[Actin]]
			* [[TYRO3]]


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	{{Box\|width=45%\|font-size=14px\| CSS & JS \|		{{Box\|width=45%\|font-size=14px\| CSS & JS \|

Bradley Monk at 02:05, 13 May 2015

2015-05-13T02:05:38Z

← Older revision		Revision as of 19:05, 12 May 2015
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			{{Box\|width=45%\|font-size=14px\| CSS & JS \|

	{{Box\|width=48%\|font-size=14px\| [https://www.mediawiki.org/wiki/Category:All_extensions Mediawiki Extensions] \|		* [[global.js]]
			* [[Special:MyPage/common.js]]

			}}<!-- END BOX -->

			{{Box\|width=45%\|font-size=14px\|float=right\| [https://www.mediawiki.org/wiki/Category:All_extensions Mediawiki Extensions] \|

	* [https://en.wikipedia.org/wiki/Help:Link_color Help:Link_color]		* [https://en.wikipedia.org/wiki/Help:Link_color Help:Link_color]

	* [https://www.mediawiki.org/wiki/Extension:Semantic_Forms/Linking_to_forms#Using_.23formlink Extension:Semantic_Forms]		* [https://www.mediawiki.org/wiki/Extension:Semantic_Forms/Linking_to_forms#Using_.23formlink Extension:Semantic_Forms]

	* [https://www.mediawiki.org/wiki/Extension:Popups#Show.2Fhide_timing Extension:Popups]		* [https://www.mediawiki.org/wiki/Extension:Popups#Show.2Fhide_timing Extension:Popups]

	}}<!-- END BOX -->		}}<!-- END BOX -->

	{{~~Box\|width=48%\|font~~-~~size=14px\|[[Diffusion\|Molecular Diffusion]]\|~~		{{Clear}}
	Over the last year my escapades and capers have been primarily directed at the study of synaptic potentiation from a neurodynamics perspective. Currently, I'm examining the membrane [[:Category:Diffusion\|diffusion]] of neurotransmitter receptors and modeling how these particles swarm and potentiate synapses. It has been an interesting transition into these topics - prior to these projects I worked primarily with brain tissue and mice, but now I find myself spending most of my day programming, running simulations, and working with equations. I'm not sure why, but I find [[:Category:Diffusion\|diffusion]] quite interesting. [[:Category:Diffusion\|Stochastic diffusion]], like that in [[:Category:Diffusion\|Brownian motion]], is a pure actuation of the basic properties of [[:Category:Statistics\|statistics]]. Given that synaptic potentiation is directly mediated by stochastic diffusion and synaptic capture of receptors, it seem that neurons have evolved into innate statistical computers. The result of 100 billion of these statistical computers making 100 trillion connections is the human brain.		----

	* [[:Category:Diffusion\|MY NOTES ON MODELING DIFFUSION]]


	}}

			{{:Help:Contents}}

Bradley Monk at 01:59, 13 May 2015

2015-05-13T01:59:23Z

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	* https://en.wikipedia.org/wiki/Help:Link_color

	* https://www.mediawiki.org/wiki/~~Extension~~:~~Semantic_Forms/Linking_to_forms#Using_.23formlink~~		{{Box\|width=48%\|font-size=14px\| [https://www.mediawiki.org/wiki/Category:All_extensions Mediawiki Extensions] \|

	~~{{Box\|width=48%\|font-size=14px\|~~[~~[Diffusion\|Molecular Diffusion]]\|~~		* [https://en.wikipedia.org/wiki/Help:Link_color Help:Link_color]
	~~Over the last year my escapades and capers have been primarily directed at the study of synaptic potentiation from a neurodynamics perspective. Currently, I'm examining the membrane [[:Category~~:~~Diffusion\|diffusion]] of neurotransmitter receptors and modeling how these particles swarm and potentiate synapses~~. It has been an interesting transition into these topics - prior to these projects I worked primarily with brain tissue and mice, but now I find myself spending most of my day programming, running simulations, and working with equations. ~~I'm not sure why, but I find [[:Category:Diffusion\|diffusion]] quite interesting. [[~~:~~Category~~:~~Diffusion\|Stochastic diffusion~~]], like that in [[:Category:Diffusion\|Brownian motion]], is a pure actuation of the basic properties of [[:Category:Statistics\|statistics]]. Given that synaptic potentiation is directly mediated by stochastic diffusion and synaptic capture of receptors, it seem that neurons have evolved into innate statistical computers. The result of 100 billion of these statistical computers making 100 trillion connections is the human brain.

	* [[:~~Category~~:~~Diffusion\|MY NOTES ON MODELING DIFFUSION]~~]		* [https://www.mediawiki.org/wiki/Extension:Semantic_Forms/Linking_to_forms#Using_.23formlink Extension:Semantic_Forms]

			* [https://www.mediawiki.org/wiki/Extension:Popups#Show.2Fhide_timing Extension:Popups]

	}}		}}<!-- END BOX -->

	{{Box\|width=45%~~\|float=right~~\|font-size=14px\|[[~~:Category:ReDiClus~~\|~~Computational Modeling~~]]\|[[~~File~~:~~Neuralinformatics.gif\|right~~\|~~link=ReDiClus~~]]		{{Box\|width=48%\|font-size=14px\|[[Diffusion\|Molecular Diffusion]]\|
	~~Broadly, neuroinformatics is the computational~~ modeling and ~~simulation of the nervous system~~. It ~~involves translating quantitative data collected from neurobiology experiments~~ into ~~mathematical representations. From there~~, ~~this symbolic representation can be used to create computer simulations~~ of ~~neural activity~~, ~~network processing, molecular dynamics~~, and ~~other physical processes~~. I ~~am using MatLab~~, ~~Python, R, and other tools to build models and animations that are directly based off my own and others empirical observations~~.		Over the last year my escapades and capers have been primarily directed at the study of synaptic potentiation from a neurodynamics perspective. Currently, I'm examining the membrane [[:Category:Diffusion\|diffusion]] of neurotransmitter receptors and modeling how these particles swarm and potentiate synapses. It has been an interesting transition into these topics - prior to these projects I worked primarily with brain tissue and mice, but now I find myself spending most of my day programming, running simulations, and working with equations. I'm not sure why, but I find [[:Category:Diffusion\|diffusion]] quite interesting. [[:Category:Diffusion\|Stochastic diffusion]], like that in [[:Category:Diffusion\|Brownian motion]], is a pure actuation of the basic properties of [[:Category:Statistics\|statistics]]. Given that synaptic potentiation is directly mediated by stochastic diffusion and synaptic capture of receptors, it seem that neurons have evolved into innate statistical computers. The result of 100 billion of these statistical computers making 100 trillion connections is the human brain.
	}}

	~~{{Box\|width=48%\|font-size=14px\|~~[[~~Connectome~~\|~~Brain Functional Connectome Project~~]]\|
	A [[~~connectome~~]] is a ~~comprehensive map~~ of the ~~neural networks within the~~ [[~~brain~~]]. ~~It details the [http://en.wikipedia.org/wiki/Efferent_nerve_fiber efferent]~~ and ~~afferent pathways within and between [[brain]] regions. Functional Connectivity refers to the function~~ of ~~a particular [[brain]] region and its information processing role within a distributed neural network~~. The ~~goal~~ of ~~this project~~ is ~~to create a platform where users can jump into~~ the ~~[[connectome]] at any given [[~~brain~~]] region and visually navigate to upstream and downstream regions; along the way, users can learn about the functional role of each [[brain]] region~~. ~~All information has been collected from empirical sources and scientific databases, in particular, the [http://atlas.brain-map.org Allan Brain Atlas].~~
	~~[[File:Connectome.jpg\|450px\|link=Connectome]]~~
	}}

			* [[:Category:Diffusion\|MY NOTES ON MODELING DIFFUSION]]

	~~{{Box\|width=45%\|float=right\|font-size=14px\|[[Brain Molecular Pathways\|Brain Molecular Pathways Project]]\|~~
	This project aims to provide annotated sets of [[Molecular Pathways\|molecular pathways]] involved in neural plasticity underlying learning and memory systems. In general, biological pathways display the series of interactions among molecules resulting in functional changes within cells and neural networks. Currently there are large scale projects dedicated to amassing pathway evidence via high-throughput methods. The goal is to translate this unwieldy biopathway data from several [http://www.genome.jp/kegg/ empirical databases] into visually digestible material, by [[Molecular Pathways\|characterizing]] the features of molecular cascades most sensitive to an ''event of interest'' (e.g. fear conditioning or amphetamine addiction).

	~~[[File:Molecular-pathway8.gif]]~~
	}}		}}





	~~{{Box\|width=48%\|Welcome to the official wiki of Brad Monk\|~~
	[[Hello]] and welcome to [[User:Monakhos\|my wiki]]. This is where I stash random information and have every intention of linking it all together someday. I'm not sure why you're here.. maybe trying to find one of my other wiki projects '''[http://onesci.com OneSci Science News]''' or '''[http://ucsd.onesci.com UCSD Psych Grad wiki]'''? If you are so inclined, recent additions to this wiki can be found in the box on the right. For a non-curated glimpse of my activity you can check out the [[Special:RecentChanges\|latest wiki updates]]. Older wiki [[content]] can be accessed using the <nowiki>[search box]</nowiki> or perusing [[Special:AllPages\| all pages]]. If you would like to contact me, you can find this info on [http://bradleymonk.com my home page].
	}}

Bradley Monk at 02:30, 10 May 2015

2015-05-10T02:30:35Z

← Older revision		Revision as of 19:30, 9 May 2015
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			* https://en.wikipedia.org/wiki/Help:Link_color

			* https://www.mediawiki.org/wiki/Extension:Semantic_Forms/Linking_to_forms#Using_.23formlink

	{{Box\|width=48%\|font-size=14px\|[[Diffusion\|Molecular Diffusion]]\|		{{Box\|width=48%\|font-size=14px\|[[Diffusion\|Molecular Diffusion]]\|

Bradley Monk at 23:37, 20 May 2014

2014-05-20T23:37:59Z

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Bradley Monk at 23:37, 20 May 2014

2014-05-20T23:37:36Z

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	* [[:Category:Diffusion\|MY NOTES ON MODELING DIFFUSION]]		* [[:Category:Diffusion\|MY NOTES ON MODELING DIFFUSION]]

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Bradley Monk at 23:36, 20 May 2014

2014-05-20T23:36:55Z

← Older revision		Revision as of 16:36, 20 May 2014
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	* [[:Category:Diffusion\|MY NOTES ON MODELING DIFFUSION]]		* [[:Category:Diffusion\|MY NOTES ON MODELING DIFFUSION]]

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Bradley Monk at 23:35, 20 May 2014

2014-05-20T23:35:58Z

← Older revision		Revision as of 16:35, 20 May 2014
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	* [[:Category:Diffusion\|MY NOTES ON MODELING DIFFUSION]]		* [[:Category:Diffusion\|MY NOTES ON MODELING DIFFUSION]]

	~~<div id{{=}}"inner" style{{=}}"position:absolute; left: 12px; top: 20px; opacity:0.2;">[[File:MolecDiff.gif\|link=Diffusion]]</div>~~
	}}		}}